STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114434668Tumor necrosis factor ligand superfamily member 6-like. (265 aa)    
Predicted Functional Partners:
LOC114448639
Tumor necrosis factor receptor superfamily member 6B-like.
    
 0.995
LOC114447785
Tumor necrosis factor receptor superfamily member 6-like.
    
 0.991
LOC114433164
FAS-associated death domain protein-like.
    
 0.969
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.969
ENSPRNP00000020556
annotation not available
   
 0.939
LOC114426288
Caspase-8-like.
   
 0.933
LOC114442219
Tumor necrosis factor ligand superfamily member 15-like.
   
 
 0.918
ENSPRNP00000020552
annotation not available
   
 0.910
lum
Lumican.
    
 0.908
LOC114443551
Tumor necrosis factor receptor superfamily member 10B-like.
    
 0.884
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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