STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nufip1Nuclear FMR1 interacting protein 1. (526 aa)    
Predicted Functional Partners:
ZNHIT6
Zinc finger HIT-type containing 6.
   
 0.968
pih1d1
PIH1 domain containing 1.
    
 0.966
nop56
NOP56 ribonucleoprotein.
    
 0.955
nop58
NOP58 ribonucleoprotein.
   
 0.950
ercc6
ERCC excision repair 6, chromatin remodeling factor.
   
  0.938
ENSPRNP00000017051
annotation not available
    
  0.934
elp2
Elongator acetyltransferase complex subunit 2.
    
  0.934
aff4
AF4/FMR2 family member 4.
    
  0.934
rb1
RB transcriptional corepressor 1.
   
  0.933
tonsl
Tonsoku like, DNA repair protein.
    
  0.932
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.