STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nop58NOP58 ribonucleoprotein. (540 aa)    
Predicted Functional Partners:
noc4l
Nucleolar complex associated 4 homolog.
   
  0.999
nop14
NOP14 nucleolar protein.
   
 0.999
eed
Periodic tryptophan protein 2 homolog.
   
 0.999
utp15
UTP15 small subunit processome component.
   
 0.999
utp3
UTP3 small subunit processome component.
   
 0.999
nhp2
NHP2 ribonucleoprotein.
   
 0.999
wdr46
WD repeat domain 46.
   
 0.999
utp4
UTP4 small subunit processome component.
   
 0.999
mphosph10
M-phase phosphoprotein 10.
   
 0.999
nop56
NOP56 ribonucleoprotein.
  
0.999
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.