STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114431893CD59 glycoprotein-like. (116 aa)    
Predicted Functional Partners:
c9
Complement C9.
    
 0.717
LOC114442936
Syntaxin-5-like.
     
 0.615
tmed2
Transmembrane p24 trafficking protein 2.
    
  0.560
ENSPRNP00000020911
annotation not available
     
 0.556
sec24c
SEC24 homolog C, COPII coat complex component.
     
 0.536
sec24a
SEC24 homolog A, COPII coat complex component.
     
 0.532
C8A
Complement C8 alpha chain.
    
 0.519
LOC114442754
Protein transport protein Sec24B-like.
     
 0.507
ENSPRNP00000009927
annotation not available
     
 0.493
sec24d
SEC24 homolog D, COPII coat complex component.
     
 0.493
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.