STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437870Aggrecan core protein-like. (514 aa)    
Predicted Functional Partners:
rps14
Ribosomal protein S14.
   
 0.927
cd74
CD74 molecule.
   
 0.927
LOC114435353
Cell division control protein 42 homolog.
   
 0.907
CDC42
Cell division control protein 42 homolog.
   
 0.907
bsx
Brain specific homeobox.
     
 0.907
LOC114453866
Fibronectin-like.
     
 0.903
mrps11
Mitochondrial ribosomal protein S11.
   
 0.888
iqgap1
IQ motif containing GTPase activating protein 1.
   
 0.887
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.887
TIAM2
T-lymphoma invasion and metastasis-inducing protein 2-like.
    
 0.879
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.