STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432281Sorting nexin-9-like. (586 aa)    
Predicted Functional Partners:
pik3cd
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.
    
  0.848
pik3cb
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.
    
  0.848
SNX18
Sorting nexin 18.
  
 
0.847
LOC114449508
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform.
    
  0.847
LOC114438470
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like.
    
  0.846
pik3cg
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma.
    
  0.846
snx33
Sorting nexin 33.
  
 
0.846
gak
Cyclin G associated kinase.
     
 0.769
LOC114431271
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.
    
  0.765
LOC114434233
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform-like.
    
  0.765
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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