STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114434097Polypyrimidine tract-binding protein 1-like. (539 aa)    
Predicted Functional Partners:
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.778
LOC114443846
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.778
LOC114439168
Heterogeneous nuclear ribonucleoprotein L-like.
   
0.760
LOC114444827
Heterogeneous nuclear ribonucleoprotein L-like.
   
0.760
LOC114446667
Heterogeneous nuclear ribonucleoprotein L-like.
   
0.760
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
0.760
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.752
LOC114449931
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.727
LOC114442466
Heterogeneous nuclear ribonucleoprotein A0-like.
   
 0.711
ENSPRNP00000021409
annotation not available
   
 0.711
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.