STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam174cFamily with sequence similarity 174 member C. (134 aa)    
Predicted Functional Partners:
LOC114435954
Macrophage-stimulating protein receptor-like.
   
 0.746
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.746
mst1r
Macrophage stimulating 1 receptor.
   
 0.746
nck1
NCK adaptor protein 1.
    
 0.693
nck2
NCK adaptor protein 2.
    
 0.693
ENSPRNP00000004418
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.597
LOC114426300
Receptor tyrosine-protein kinase erbB-4-like.
    
  0.555
LOC114438163
Receptor tyrosine-protein kinase erbB-3-like.
    
  0.555
egfr
Epidermal growth factor receptor.
    
  0.555
erbb2
Erb-b2 receptor tyrosine kinase 2.
    
  0.555
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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