STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114433377Chymotrypsin B. (264 aa)    
Predicted Functional Partners:
LOC114435954
Macrophage-stimulating protein receptor-like.
    
  0.811
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.811
mst1r
Macrophage stimulating 1 receptor.
    
  0.811
f3
Coagulation factor III, tissue factor.
    
 0.768
LOC114426501
Tissue factor pathway inhibitor-like.
    
 0.746
mmp9
Matrix metallopeptidase 9.
   
 0.693
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.692
tfpi2
Tissue factor pathway inhibitor 2.
    
 0.676
cpb1
Carboxypeptidase B1.
  
 0.660
LOC114450356
Tissue factor-like.
    
 0.657
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.