STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nup205Nucleoporin 205. (1994 aa)    
Predicted Functional Partners:
nup93
Nucleoporin 93.
   
 0.999
nup155
Nucleoporin 155.
   
 0.999
LOC114453748
ranBP2-like and GRIP domain-containing protein 3.
   
 0.999
nup85
Nucleoporin 85.
   
 0.999
NUP54
Nucleoporin 54.
   
 0.998
nup35
Nucleoporin 35.
   
 0.998
nup107
Nucleoporin 107.
   
 0.997
nup160
Nucleoporin 160.
   
 0.997
NUP214
Nucleoporin 214.
   
 0.994
seh1l
SEH1 like nucleoporin.
   
 0.994
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.