STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114442428Catenin delta-1-like. (930 aa)    
Predicted Functional Partners:
cdh1
Cadherin 1.
    
 0.951
ctnnb1
Catenin beta 1.
    
 0.949
LOC114447059
Cadherin-5-like.
    
 0.907
LOC114439217
Rho-related GTP-binding protein RhoA-C-like.
    
 0.886
egfr
Epidermal growth factor receptor.
    
 0.886
erbb2
Erb-b2 receptor tyrosine kinase 2.
    
 0.886
LOC114452981
Melanoma receptor tyrosine-protein kinase-like.
    
 0.886
ctnna1
Catenin alpha 1.
   
 0.876
ctnna2
Catenin alpha 2.
   
 0.876
LOC114435353
Cell division control protein 42 homolog.
    
 0.875
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.