STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cebpaCCAAT enhancer binding protein alpha. (301 aa)    
Predicted Functional Partners:
LOC114439147
CCAAT/enhancer-binding protein beta-like.
   
0.933
ddit3
DNA damage inducible transcript 3.
    
 0.890
LOC114431910
Runt-related transcription factor 1-like.
    
 0.851
runx2
RUNX family transcription factor 2.
    
 0.797
runx3
RUNX family transcription factor 3.
    
 0.797
cbfa2t3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
 0.795
runx1t1
RUNX1 partner transcriptional co-repressor 1.
   
 0.795
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.794
LOC114433440
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.794
pdgfra
Platelet derived growth factor receptor alpha.
     
 0.782
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.