STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114439151Ras-related protein Rap-1A. (185 aa)    
Predicted Functional Partners:
rapgef2
Rap guanine nucleotide exchange factor 2.
   
 0.961
krit1
KRIT1 ankyrin repeat containing.
    
 0.959
afdn
Afadin, adherens junction formation factor.
    
 0.930
raf1
Raf-1 proto-oncogene, serine/threonine kinase.
  
 0.913
braf
B-Raf proto-oncogene, serine/threonine kinase.
  
 0.913
LOC114432947
Intersectin-2-like.
    
 0.896
ENSPRNP00000041654
annotation not available
    
 0.896
LOC114441977
Serine/threonine-protein kinase A-Raf-like.
  
 0.893
rassf5
Ras association domain family member 5.
    
 0.892
rapgef6
Rap guanine nucleotide exchange factor 6.
    
 0.890
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.