STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437356BH3-interacting domain death agonist-like. (178 aa)    
Predicted Functional Partners:
ENSPRNP00000020552
annotation not available
     
 0.888
ENSPRNP00000020556
annotation not available
     
 0.869
LOC114426288
Caspase-8-like.
     
 0.869
LOC114426390
Granzyme B-like.
     
 0.858
LOC114426390-2
Granzyme B-like.
     
 0.858
LOC114445968
Cathepsin L1-like.
     
 0.853
ctsb
Cathepsin B.
     
 0.844
LOC114448146
Cathepsin K-like.
     
 0.837
LOC114433279
Cathepsin B-like.
     
 0.834
casp2
Caspase 2.
     
 0.834
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.