STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cog8Component of oligomeric golgi complex 8. (607 aa)    
Predicted Functional Partners:
cog1
Component of oligomeric golgi complex 1.
   
 0.999
cog7
Component of oligomeric golgi complex 7.
   
 0.999
cog3
Component of oligomeric golgi complex 3.
    
 0.999
cog6
Component of oligomeric golgi complex 6.
   
 0.999
COG5
Component of oligomeric golgi complex 5.
    
 0.999
cog2
Component of oligomeric golgi complex 2.
    
 0.998
cog4
Component of oligomeric golgi complex 4.
   
 0.996
smim7
Small integral membrane protein 7.
   
 0.992
stx16
Syntaxin 16.
    
 0.943
arfrp1
ADP ribosylation factor related protein 1.
   
 0.933
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.