STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437353Probable polypeptide N-acetylgalactosaminyltransferase 8. (560 aa)    
Predicted Functional Partners:
c1galt1c1
C1GALT1 specific chaperone 1.
     
 0.845
LOC114439027
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like.
     
 0.841
LOC114435307
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
     
 0.841
LOC114440866
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like.
     
 0.840
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
     
 0.840
c1galt1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.834
LOC114437684
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like.
     
 0.834
galnt7
Polypeptide N-acetylgalactosaminyltransferase 7.
  
 
0.667
LOC114435580
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7-like.
     
 0.590
gcnt4
Glucosaminyl (N-acetyl) transferase 4.
     
 0.590
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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