STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438722Transketolase-like protein 2. (627 aa)    
Predicted Functional Partners:
taldo1
Transaldolase 1.
  
 0.989
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.984
pgk1
Phosphoglycerate kinase 1.
  
 0.962
rpe
Ribulose-5-phosphate-3-epimerase.
  
 0.956
LOC114451780
Glucose-6-phosphate isomerase-like.
  
 0.943
gpi
Glucose-6-phosphate isomerase.
  
 0.943
rpia
Ribose 5-phosphate isomerase A.
   
 0.936
LOC114436492
Enolase-like.
  
 0.934
LOC114448015
Glyceraldehyde-3-phosphate dehydrogenase 2.
  
 0.932
eno4
Enolase 4.
  
 0.932
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.