STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000002075Family with sequence similarity 133 member B. (124 aa)    
Predicted Functional Partners:
ccdc174
Coiled-coil domain containing 174.
   
    0.575
thoc7
THO complex 7.
      
 0.499
rab3gap2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.457
thoc3
THO complex 3.
      
 0.444
c21h3orf70
Chromosome 21 C3orf70 homolog.
      
 0.422
ENSPRNP00000051059
annotation not available
      
 0.422
knop1
Lysine rich nucleolar protein 1.
      
 0.414
thoc6
THO complex 6.
      
 0.400
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.