STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC2ELKS/RAB6-interacting/CAST family member 2. (994 aa)    
Predicted Functional Partners:
ENSPRNP00000012799
annotation not available
    
 
 0.859
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.859
optn
Optineurin.
    
 0.721
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.721
map3k7
Mitogen-activated protein kinase kinase kinase 7.
    
  0.649
LOC114427059
Mitogen-activated protein kinase kinase kinase 7-like.
    
  0.649
LOC114447076
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
    
 0.621
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.621
RIMS1
Regulating synaptic membrane exocytosis protein 1-like.
    
 
 0.578
rims3
Regulating synaptic membrane exocytosis 3.
    
 
 0.578
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.