STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114439040semaphorin-3A-like. (755 aa)    
Predicted Functional Partners:
LOC114435954
Macrophage-stimulating protein receptor-like.
    
 0.750
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.750
mst1r
Macrophage stimulating 1 receptor.
    
 0.750
nrp1
Neuropilin 1.
    
 0.735
NRP1
Neuropilin-1a-like.
    
 0.616
mfrp
Membrane frizzled-related protein.
    
 0.613
cubn
Cubilin.
    
 0.601
pcolce2
Procollagen C-endopeptidase enhancer 2.
    
 0.601
LOC114445935
Procollagen C-endopeptidase enhancer 2-like.
    
 0.601
ENSPRNP00000055210
CUB domain containing protein 2.
    
 0.601
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.