STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438292Helicase ARIP4-like. (1472 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.960
actr5
Actin related protein 5.
    
 0.790
polr2f
RNA polymerase II subunit F.
   
 0.788
mphosph8
M-phase phosphoprotein 8.
    
 0.776
arid4a
AT-rich interaction domain 4A.
    
 0.767
ENSPRNP00000027756
Translocase of outer mitochondrial membrane 20.
    
 0.767
ENSPRNP00000034425
annotation not available
    
 0.761
ENSPRNP00000056581
annotation not available
  
 0.748
pcna
Proliferating cell nuclear antigen.
   
 0.741
polr1c
RNA polymerase I and III subunit C.
   
 0.734
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.