STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114440607General transcription factor II-I repeat domain-containing protein 1-like. (280 aa)    
Predicted Functional Partners:
LOC114440286
SUMO-conjugating enzyme UBC9-like.
    
  0.514
ube2i
Ubiquitin conjugating enzyme E2 I.
    
  0.514
kctd2
Potassium channel tetramerization domain containing 2.
    
  0.514
ercc6
ERCC excision repair 6, chromatin remodeling factor.
    
  0.507
LOC114442799
Putative methyltransferase NSUN7.
      
 0.471
akap17a
A-kinase anchoring protein 17A.
      
 0.457
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.455
pgbd5
piggyBac transposable element derived 5.
      
 0.446
naif1
Nuclear apoptosis inducing factor 1.
   
  
 0.445
ENSPRNP00000034425
annotation not available
      
 0.443
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.