STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atf6Activating transcription factor 6. (643 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein family A (Hsp70) member 5.
    
 0.929
atf4
Activating transcription factor 4.
     
 0.917
ddit3
DNA damage inducible transcript 3.
   
 0.905
creb3l1
cAMP responsive element binding protein 3 like 1.
    
0.898
LOC114442001
Cyclic AMP-responsive element-binding protein 3-like protein 3.
    
 0.886
creb3l2
cAMP responsive element binding protein 3 like 2.
    
0.872
wfs1
Wolframin ER transmembrane glycoprotein.
    
 0.870
LOC114434400
Wolframin-like.
    
 0.870
xbp1
X-box binding protein 1.
    
 0.862
creb5
cAMP responsive element binding protein 5.
     
 0.849
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.