STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114429236Transmembrane protein FAM155A-like. (385 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 
 0.997
nalcn
Sodium leak channel, non-selective.
   
 
 0.612
cacna1a
Calcium voltage-gated channel subunit alpha1 A.
   
 
 0.510
LOC114432194
Sodium channel protein type 2 subunit alpha-like.
   
 
 0.510
tpcn1
Two pore segment channel 1.
   
 
 0.510
LOC114436433
Voltage-dependent L-type calcium channel subunit alpha-1D-like.
   
 
 0.510
cacna1e
Calcium voltage-gated channel subunit alpha1 E.
   
 
 0.510
LOC114436828
Sodium channel protein type 8 subunit alpha-like.
   
 
 0.510
LOC114436809
Dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like.
   
 
 0.510
LOC114449252
Sodium channel protein type 4 subunit alpha B-like.
   
 
 0.510
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.