STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000002298annotation not available (120 aa)    
Predicted Functional Partners:
LOC114432609
Lysine-specific demethylase 6A-like.
   
 0.888
ENSPRNP00000050913
Lysine (K)-specific demethylase 6B, b.
   
 0.888
ENSPRNP00000053748
annotation not available
   
 0.888
ENSPRNP00000053787
annotation not available
   
 0.888
kdm6a
Lysine demethylase 6A.
   
 0.888
setd2
SET domain containing 2, histone lysine methyltransferase.
   
 0.840
hat1
Histone acetyltransferase 1.
    
 0.836
arid4a
AT-rich interaction domain 4A.
   
 0.833
ENSPRNP00000027756
Translocase of outer mitochondrial membrane 20.
   
 0.833
dot1l
DOT1 like histone lysine methyltransferase.
   
 0.821
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.