STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL8Oxysterol binding protein like 8. (918 aa)    
Predicted Functional Partners:
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.836
npc1
NPC intracellular cholesterol transporter 1.
   
 0.836
gale
UDP-galactose-4-epimerase.
     
 0.721
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.705
scap
SREBF chaperone.
   
 0.643
rhoq
Ras homolog family member Q.
    
  0.574
ENSPRNP00000031141
Ras homolog family member H.
    
  0.574
ppp5c
Protein phosphatase 5 catalytic subunit.
    
  0.559
LOC114436252
Ras-related protein rab7.
    
  0.546
LOC114436087
Ras-related protein rab7-like.
    
  0.546
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.