STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAL3ST1galactose-3-O-sulfotransferase 1. (436 aa)    
Predicted Functional Partners:
galc
Galactosylceramidase.
     
 0.869
ugt8
UDP glycosyltransferase 8.
   
 
 0.862
LOC114441177
UDP-glucuronosyltransferase 3A1-like.
   
 
 0.862
ENSPRNP00000014612
annotation not available
  
  
 
0.841
LOC114450845
galactose-3-O-sulfotransferase 2-like.
  
  
 
0.839
ENSPRNP00000053367
annotation not available
  
  
 
0.839
LOC114443889
Galactosylceramide sulfotransferase-like.
  
  
 
0.834
gal3st3
galactose-3-O-sulfotransferase 3.
  
  
 
0.812
LOC114445538
galactose-3-O-sulfotransferase 2-like.
  
  
 
0.810
ENSPRNP00000048339
UDP glucuronosyltransferase 5 family, polypeptide F1.
   
 
 0.564
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.