STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000002390annotation not available (339 aa)    
Predicted Functional Partners:
cd34
CD34 molecule.
   
 
 0.854
ENSPRNP00000030493
annotation not available
   
 
 0.828
LOC114433929
Golgi apparatus protein 1-like.
    
 0.786
LOC114451858
Golgi apparatus protein 1-like.
    
 0.786
LOC114437870
Aggrecan core protein-like.
   
 0.771
snx17
Sorting nexin 17.
    
 
 0.770
ap2m1
Adaptor related protein complex 2 subunit mu 1.
    
  0.675
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.652
ENSPRNP00000042338
annotation not available
    
 0.620
ENSPRNP00000011739
annotation not available
   
 0.608
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.