STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441351TBC1 domain family member 10A-like. (507 aa)    
Predicted Functional Partners:
LOC114440113
Ras-related protein Rab-35-like.
   
 0.771
rab35
RAB35, member RAS oncogene family.
   
 0.771
ift27
Intraflagellar transport 27.
   
 0.685
ENSPRNP00000029885
ADP-ribosylation factor 6b.
     
 0.660
arf6
ADP ribosylation factor 6.
     
 0.660
arl15
ADP ribosylation factor like GTPase 15.
     
 0.602
LOC114431805
ATP-dependent RNA helicase DDX3X-like.
   
 
  0.563
ddx3x
DEAD-box helicase 3 X-linked.
   
 
  0.563
LOC114428814
Interleukin-31 receptor subunit alpha-like.
   
 
  0.563
LOC114441227
Interleukin-6 receptor subunit beta-like.
   
 
  0.557
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.