STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polr1bRNA polymerase I subunit B. (1134 aa)    
Predicted Functional Partners:
polr1c
RNA polymerase I and III subunit C.
  
 0.999
znrd1
Zinc ribbon domain containing 1.
   
 0.999
polr1a
RNA polymerase I subunit A.
  
 0.999
twistnb
TWIST neighbor.
   
 0.999
polr2f
RNA polymerase II subunit F.
  
 0.999
cd3eap
CD3e molecule associated protein.
   
 0.999
polr1e
RNA polymerase I subunit E.
   
 0.999
polr2k
RNA polymerase II subunit K.
   
 0.999
polr2l
RNA polymerase II subunit L.
  
 0.999
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
   
 0.998
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.