STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000002572annotation not available (239 aa)    
Predicted Functional Partners:
actl6a
Actin like 6A.
    
 0.841
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.744
LOC114444137
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like.
    
 0.744
sap30l
SAP30 like.
    
 0.741
LOC114435720
Protein polybromo-1-like.
   
 0.699
LOC114436216
Protein polybromo-1-like.
   
 0.699
kdm7a
Lysine demethylase 7A.
     
 0.638
phf8
PHD finger protein 8.
     
 0.638
phf2
PHD finger protein 2.
     
 0.638
sap18
Sin3A associated protein 18.
     
 0.628
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.