STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000002641annotation not available (596 aa)    
Predicted Functional Partners:
LOC114445993
Transcription initiation factor TFIID subunit 9-like.
    
 0.958
taf12
TATA-box binding protein associated factor 12.
    
 0.956
ENSPRNP00000007907
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.953
tada3
Transcriptional adaptor 3.
    
 0.952
trrap
Transformation/transcription domain associated protein.
   
 0.949
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.948
sgf29
SAGA complex associated factor 29.
    
 0.938
LOC114440044
Nuclear receptor subfamily 1 group D member 1-like.
    
 0.909
supt7l
SPT7 like, STAGA complex gamma subunit.
    
 0.908
tada2a
Transcriptional adaptor 2A.
    
 0.890
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.