STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114449222Rab effector MyRIP-like. (1341 aa)    
Predicted Functional Partners:
exoc4
Exocyst complex component 4.
     
 0.954
exoc3
Exocyst complex component 3.
     
 0.949
LOC114427999
Tumor necrosis factor alpha-induced protein 2-like.
     
 0.917
LOC114445275
Tumor necrosis factor alpha-induced protein 2-like.
     
 0.837
LOC114446685
Tumor necrosis factor alpha-induced protein 2-like.
     
 0.837
exoc6b
Exocyst complex component 6B.
     
 0.823
exoc6
Exocyst complex component 6.
     
 0.823
LOC114440116
Eukaryotic translation initiation factor 1b.
     
 0.813
rab27a
RAB27A, member RAS oncogene family.
    
 0.737
LOC114443816
Ras-related protein Rab-27B-like.
    
 0.737
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.