STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114439732Aspartate beta-hydroxylase domain-containing protein 2-like. (362 aa)    
Predicted Functional Partners:
LOC114448578
GON-4-like protein.
     
 0.702
ENSPRNP00000012361
annotation not available
   
 
 0.617
RYR2
Ryanodine receptor 2.
   
 
 0.617
LOC114428552
Ryanodine receptor 3-like.
   
 
 0.617
LOC114446821
Ryanodine receptor 2-like.
   
 
 0.617
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.524
srrd
SRR1 domain containing.
      
 0.478
acbd6
acyl-CoA binding domain containing 6.
      
 0.475
tmem53
Transmembrane protein 53.
      
 0.475
LOC114438601
Peptidyl-prolyl cis-trans isomerase FKBP1A-like.
     
 0.467
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.