STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC11444948612 kDa FK506-binding protein-like. (140 aa)    
Predicted Functional Partners:
LOC114437426
Calcineurin subunit B type 1-like.
   
 0.881
ENSPRNP00000012361
annotation not available
    
 0.834
RYR2
Ryanodine receptor 2.
    
 0.834
LOC114428552
Ryanodine receptor 3-like.
    
 0.834
LOC114446821
Ryanodine receptor 2-like.
    
 0.834
mtor
Mechanistic target of rapamycin kinase.
    
 
 0.831
calm2
Calmodulin 2.
   
 0.824
calm3
Calmodulin 3.
   
 0.824
calm1
Calmodulin 1.
   
 0.824
LOC114427091
Calmodulin.
   
 0.824
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.