STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114451082RNA-binding protein 4.1-like. (420 aa)    
Predicted Functional Partners:
LOC114442466
Heterogeneous nuclear ribonucleoprotein A0-like.
  
 0.753
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.723
LOC114443846
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.723
hnrnpab
Heterogeneous nuclear ribonucleoprotein A/B.
  
  0.704
hnrnpd
Heterogeneous nuclear ribonucleoprotein D.
  
  0.702
LOC114445663
Heterogeneous nuclear ribonucleoprotein A/B-like.
  
  0.702
ENSPRNP00000021409
annotation not available
  
0.702
LOC114438077
Heterogeneous nuclear ribonucleoprotein A1-like.
  
0.700
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
0.674
tra2b
Transformer 2 beta homolog.
  
  0.668
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.