STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A13Sodium- and chloride-dependent GABA transporter 2-like. (612 aa)    
Predicted Functional Partners:
slc1a1
Solute carrier family 1 member 1.
    
 0.610
slc6a3
Solute carrier family 6 member 3.
  
  
 
0.581
slc6a2
Solute carrier family 6 member 2.
  
  
 
0.581
LOC114428104
Excitatory amino acid transporter 5-like.
    
 0.577
LOC114449367
Excitatory amino acid transporter 5-like.
    
 0.577
LOC114434256
Excitatory amino acid transporter 5-like.
    
 0.577
LOC114434330
Excitatory amino acid transporter 1-like.
    
 0.573
LOC114441749
Excitatory amino acid transporter 1-like.
    
 0.573
LOC114443501
Excitatory amino acid transporter 1-like.
    
 0.573
LOC114449489
Excitatory amino acid transporter 1-like.
    
 0.573
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.