STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erp44Endoplasmic reticulum protein 44. (409 aa)    
Predicted Functional Partners:
LOC114445746
Peroxiredoxin-4-like.
  
 0.963
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
  
 0.907
suox
Sulfite oxidase.
   
 0.906
LOC114448986
Cytochrome b5 reductase 4.
  
 0.845
ero1a
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.814
ero1b
Endoplasmic reticulum oxidoreductase 1 beta.
   
 0.814
prdx3
Peroxiredoxin 3.
  
 0.808
LOC114443362
Peroxiredoxin-1-like.
  
 0.805
LOC114449477
Peroxiredoxin-1.
  
 0.800
LOC114428798
Mitochondrial peptide methionine sulfoxide reductase-like.
   
 0.787
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.