STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stx17Syntaxin 17. (299 aa)    
Predicted Functional Partners:
snap29
Synaptosome associated protein 29.
    
 0.999
vps39
VPS39 subunit of HOPS complex.
   
 0.998
vps41
VPS41 subunit of HOPS complex.
    
 0.997
LOC114441774
Vesicle-associated membrane protein 8-like.
   
 0.992
LOC114441480
Vesicle-associated membrane protein 8-like.
   
 0.992
vps16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.990
vamp7
Vesicle associated membrane protein 7.
   
 0.989
vps11
VPS11 core subunit of CORVET and HOPS complexes.
   
 0.988
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.988
stx8
Syntaxin 8.
    
 0.987
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.