STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alg2ALG2 alpha-1,3/1,6-mannosyltransferase. (405 aa)    
Predicted Functional Partners:
mus81
MUS81 structure-specific endonuclease subunit.
   
 0.993
gmppb
GDP-mannose pyrophosphorylase B.
  
 0.944
yipf6
Yip1 domain family member 6.
  
 0.940
alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
    
 0.940
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 0.917
blm
BLM RecQ like helicase.
   
 
 0.907
ephx2
Epoxide hydrolase 2.
  
 0.904
alg11
ALG11 alpha-1,2-mannosyltransferase.
   
0.891
gale
UDP-galactose-4-epimerase.
    
 0.891
LOC114426631
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like.
   
0.891
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.