STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432516Glycogenin-1-like. (392 aa)    
Predicted Functional Partners:
gbe1
1,4-alpha-glucan branching enzyme 1.
   
 0.953
gys1
Glycogen synthase 1.
   
 0.951
LOC114446839
Glycogen [starch] synthase, liver-like.
   
 0.951
pold2
DNA polymerase delta 2, accessory subunit.
   
 0.935
pold1
DNA polymerase delta 1, catalytic subunit.
    
 0.933
mad2l2
Mitotic arrest deficient 2 like 2.
    
 0.928
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.926
pole
DNA polymerase epsilon, catalytic subunit.
    
 0.865
pola1
DNA polymerase alpha 1, catalytic subunit.
    
 0.858
pcna
Proliferating cell nuclear antigen.
   
 0.854
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.