STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
man1c1Mannosidase alpha class 1C member 1. (642 aa)    
Predicted Functional Partners:
LOC114429257
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like.
    
 0.891
mgat1
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
    
 0.891
man1b1
Mannosidase alpha class 1B member 1.
  
 
0.887
LOC114443929
Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like.
  
 
0.886
ganab
Glucosidase II alpha subunit.
   
 
 0.847
man1a1
Mannosidase alpha class 1A member 1.
  
  
 
0.834
man1a2
Mannosidase alpha class 1A member 2.
  
  
 
0.834
LOC114441877
Lysosomal alpha-glucosidase-like.
     
 0.591
sez6l2
Seizure related 6 homolog like 2.
     
 0.591
LOC114441872
Myogenesis-regulating glycosidase-like.
     
 0.591
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.