STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441849Putative claudin-24. (231 aa)    
Predicted Functional Partners:
cdc6
Cell division cycle 6.
   
 0.905
orc2
Origin recognition complex subunit 2.
   
 0.889
LOC114449214
Partitioning defective 3 homolog.
   
  0.852
PARD3
Partitioning defective 3 homolog.
   
  0.852
LOC114437105
Tight junction protein ZO-1-like.
    
 0.849
LOC114434314
Tight junction protein ZO-3-like.
    
 0.849
cdc27
Cell division cycle 27.
    
 0.849
LOC114433785
Tight junction protein ZO-1-like.
    
 0.849
cdc7
Cell division cycle 7.
   
 0.843
ENSPRNP00000039332
annotation not available
   
 
  0.842
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.