STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim59Tripartite motif containing 59. (414 aa)    
Predicted Functional Partners:
ifih1
Interferon induced with helicase C domain 1.
    
 0.605
dhx58
DExH-box helicase 58.
    
  0.591
sting1
Stimulator of interferon response cGAMP interactor 1.
    
  0.590
rps27a
Ribosomal protein S27a.
    
  0.562
gmps
Guanine monophosphate synthase.
    
  0.544
trim32
Tripartite motif containing 32.
    
0.541
LOC114449080
Apoptosis-associated speck-like protein containing a CARD.
    
  0.541
LOC114448260
Apoptosis-associated speck-like protein containing a CARD.
    
  0.541
ecsit
ECSIT signaling integrator.
    
 
 0.539
pidd1
P53-induced death domain protein 1.
    
  0.522
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.