STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL12Kelch like family member 12. (598 aa)    
Predicted Functional Partners:
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.852
LOC114447105
Cullin-3-like.
    
 0.818
LOC114434621
Cullin-3-like.
    
 0.818
LOC114444719
Cullin-3.
    
 0.818
LOC114449256
Cullin-3-like.
    
 0.818
CUL3
Cullin-3-like.
    
 0.818
rbx1
Ring-box 1.
    
 0.816
ENSPRNP00000000551
penta-EF-hand domain containing 1.
    
 0.804
GAN
Gigaxonin.
  
 
 
0.795
klhl7
Kelch like family member 7.
  
 
 
0.792
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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