STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114439154Ubiquitin-conjugating enzyme E2 variant 1-like. (163 aa)    
Predicted Functional Partners:
birc6
Baculoviral IAP repeat containing 6.
   
 0.994
ube2n
Ubiquitin conjugating enzyme E2 N.
   
 0.980
LOC114430264
Ubiquitin-conjugating enzyme E2 N-like.
   
 0.980
rps27a
Ribosomal protein S27a.
   
 0.974
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.970
hltf
Helicase like transcription factor.
    
 0.959
LOC114442537
Ubiquitin-conjugating enzyme E2 K.
   
0.921
ube2k
Ubiquitin conjugating enzyme E2 K.
   
0.921
ube2w
Ubiquitin conjugating enzyme E2 W.
   
 0.914
rnf8
Ring finger protein 8.
   
 0.914
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.