STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgat5Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase. (746 aa)    
Predicted Functional Partners:
mgat4c
MGAT4 family member C.
   
 0.914
mgat4b
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
     
 0.904
MGAT4C
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like.
   
 0.896
mgat4a
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A.
     
 0.892
LOC114442509
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like.
   
 0.855
ENSPRNP00000044938
annotation not available
    
  0.838
LOC114426295
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A-like.
  
  
 
0.837
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like.
  
  
 
0.833
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
     
 0.733
ap2m1
Adaptor related protein complex 2 subunit mu 1.
    
  0.722
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.