STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndrg3NDRG family member 3. (384 aa)    
Predicted Functional Partners:
agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4.
    
 0.566
agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3.
    
 0.566
rmdn2
Regulator of microtubule dynamics 2.
    
 0.541
lclat1
Lysocardiolipin acyltransferase 1.
    
 0.541
rmdn1
Regulator of microtubule dynamics 1.
    
 0.541
LOC114429173
Regulator of microtubule dynamics protein 3-like.
    
 0.540
agpat5
1-acylglycerol-3-phosphate O-acyltransferase 5.
    
  0.536
LOC114440485
Transmembrane protein 180-like.
    
  0.536
lpgat1
Lysophosphatidylglycerol acyltransferase 1.
    
  0.535
phf20
PHD finger protein 20.
      
 0.474
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.