STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000003387annotation not available (364 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1.
    
 0.764
stam2
Signal transducing adaptor molecule 2.
    
 0.621
stam
Signal transducing adaptor molecule.
    
 0.621
ENSPRNP00000000974
annotation not available
    
 0.452
LOC114451485
Telomerase reverse transcriptase-like.
    
 0.452
c16h8orf37
Chromosome 16 C8orf37 homolog.
      
 0.436
arl2bp
ADP ribosylation factor like GTPase 2 binding protein.
      
 0.435
sox7
SRY-box transcription factor 7.
    
 
 0.419
ttc8
Tetratricopeptide repeat domain 8.
      
 0.416
LOC114442806
RDS/peripherin-like protein xRDS35.
   
  
 0.405
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.