STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem161bTransmembrane protein 161B. (492 aa)    
Predicted Functional Partners:
kbtbd12
Kelch repeat and BTB domain containing 12.
      
 0.540
immp2l
Inner mitochondrial membrane peptidase subunit 2.
      
 0.534
tmem117
Transmembrane protein 117.
      
 0.519
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.517
ggps1
Geranylgeranyl diphosphate synthase 1.
      
 0.491
LOC114437686
Matrix-remodeling-associated protein 7-like.
      
 0.483
SUMF2
Sulfatase modifying factor 2.
      
 0.480
TAFA2
TAFA chemokine like family member 2.
      
 0.478
cwc22
CWC22 spliceosome associated protein homolog.
      
 0.476
ccdc169
Coiled-coil domain containing 169.
      
 0.472
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.